Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901561.1_cds_XP_016451612.1_45942
CDS Infomation

[gene=LOC107776251] [db_xref=GeneID:107776251] [protein=two-component response regulator ARR12-like isoform X3] [protein_id=XP_016451612.1] [location=complement(join(36107..36115,36459..37000,37037..37691,37780..37856,37953..38345,38526..38678,39320..39479))] [gbkey=CDS]
Sequence

ATGACTGTGGAAGAAATTAGAGGAAATGATAAGGGTGGTGAAAAGGGAAATTATCAAAAT
TATGATAATTTTCCAATTGGTATGAGAGTTCTTGCTGTTGATGATGACCCTATTTGTTTG
AAGCTTTTGGATGGTTTGCTCAGGAAATGCCAGTATCATGTAACTACCACAAGTCAGGCA
AGAATGGCATTGAAGATGTTGAGGGAGAATAGAGATAGATTTGATTTGGTAATCAGTGAT
GTTCACATGCCTGATATGGATGGCTTTAAACTTCTTGAACTTGTTGGTCTTGAGATGGAT
CTTCCAGTTATAATGTTGTCCGCAAACAGCGATACGAAACTTGTAATGAAGGGAATTAGT
CATGGTGCTTGCGACTATTTGGTGAAACCTGTGCGGCTCGAGGAGCTGAGGAATGTATGG
CAACATGTAATCCGAAGAAAGAACGTTGAACCTAAGAGCCGGAGCAAGTCTAACGATCAT
GACAAATCTTATCGGGAAAGTGGAGAAGGTGGTCGAGGGCAATCACCGACAGGTAATGCT
GATCAAAACGGAAAACTTAACAAGAAAAGGAAGGATGAAGAAGATGAGACTGATGAAAAT
GGAACTGACAATGAAGATACAGCAAATCAGAAGAAAGCTCGTGTCGTTTGGTCCATAGAG
CTTCACAGGAAGTTTGTAGCAGCTGTTAACCAGTTGGGCATCGAAAAAGCTGTCCCAAAG
AGGATTCTTGACCTAATGAATGTTGACGGGCTTACAAGGGAAAATGTGGCAAGCCATCTC
CAGAAGTATAGGCTTTACTTGAAAAGGATAAGTTCAGTAGCAACCCAGCAAGCCAACATG
GTTGCCGCATTAGGGGGCAAGGATTATATGCGAATGGGCTCATTGGATGGACTTGGAGAT
TTTCGAACATTAGCTGGATCAGGACGGTATGCTCATCCTACCTTGTCATCATACACTTCA
GGGGGCATGCTTGGCAGATTAAATAGTGCTGCTGGTCTAAGTGTTCGCAATCTGGCCGCA
CCTCAGCTACTCCAACCTAGTCATGGTCAAAGTTTGAACAACTCCATTAACGCTTTTGCA
AAATTGAATCCGAATATTCTACCTGCTAGCCAGAATGCTAGTTTATTTCATGGAATTCCT
GCATCGTTGGAGCTTGATCAATTGCAACAGAATAAGTCCTCTGTACATATTCCTTTGGAT
GAGTCGAGACTGCTGACAACTGATGTACTTGGTTGCACAAATAACTCCTTATCCAATGTT
TCGAATAATCCTATGATACTACAAGGGAACTCTATCAACATGACTCCATTTAGCTCGGAC
TCCTTCAATAGCGGTGTTAACGGTTCTTCCAATTTTTTAGACCAAGGTAGATGTAACGAG
AACTGGCAAAATTCGGTTCAGTTATCGAAGTTCCAGTCGAGTTCTTTCCCATTGACCAAA
GCCTTCCTTAACAGCCATTTGCCTCAAAGTAGTGTTAGAGATGATAATTCTTCAGCTGCG
CCGCCTCATTTGCAGAACAGCTCTCTTGATTTTGCTTCCACCACCACAGTTTCGCCTTCT
TTTGAAGATTCAAGGGGAAAAATCCAATTTCGTGATTGTACGGCTGGCGCTGTTCAGAGT
ATGAATCAAACACAGTCTCAAGCATGGGCCGAAAATAAACAACGTTATTCCAACAATTCA
AATAATACTTTCGGCAACTTAAGCTCCCAGGTTCCCAACAATGGTGGTAACATCACTTCT
TTTAGCCATAGTATTCACCAAAGCAATGAGAACTTTGGCAGAAAGATGGACATGTCACTG
ATTGGTAGATCAAATGGAGGTTCGTCGGCACTCATACAGCATGCTGAGAATGAAAAGTTA
ACCTCCGACTCAAGGACAAGGTCAAATGAAGATTACCTCTTGGAGCCAACAAAGCAACAA
GTTGGTTTTAGTCCACAGGGCTATGACTCCCTAGATGATCTAATGAGTGCAATGAAACGG
AGGGTGTGA

Peptide Sequence

PEP ID

XP_016451612.1
PEP Infomation

PREDICTED: two-component response regulator ARR12-like isoform X3 [Nicotiana tabacum]
Sequence

MTVEEIRGNDKGGEKGNYQNYDNFPIGMRVLAVDDDPICLKLLDGLLRKCQYHVTTTSQA
RMALKMLRENRDRFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANSDTKLVMKGIS
HGACDYLVKPVRLEELRNVWQHVIRRKNVEPKSRSKSNDHDKSYRESGEGGRGQSPTGNA
DQNGKLNKKRKDEEDETDENGTDNEDTANQKKARVVWSIELHRKFVAAVNQLGIEKAVPK
RILDLMNVDGLTRENVASHLQKYRLYLKRISSVATQQANMVAALGGKDYMRMGSLDGLGD
FRTLAGSGRYAHPTLSSYTSGGMLGRLNSAAGLSVRNLAAPQLLQPSHGQSLNNSINAFA
KLNPNILPASQNASLFHGIPASLELDQLQQNKSSVHIPLDESRLLTTDVLGCTNNSLSNV
SNNPMILQGNSINMTPFSSDSFNSGVNGSSNFLDQGRCNENWQNSVQLSKFQSSSFPLTK
AFLNSHLPQSSVRDDNSSAAPPHLQNSSLDFASTTTVSPSFEDSRGKIQFRDCTAGAVQS
MNQTQSQAWAENKQRYSNNSNNTFGNLSSQVPNNGGNITSFSHSIHQSNENFGRKMDMSL
IGRSNGGSSALIQHAENEKLTSDSRTRSNEDYLLEPTKQQVGFSPQGYDSLDDLMSAMKR
RV

Transcript Sequence

Gene sequence data has not been registered.